AthRiboNC - miRNA: ath-MIR396b

Gene Summary:

ncRNA Name: ath-MIR396b

Parent Gene: AT5G35407

Chromosome: 5

Start: 13611798

End: 13611932

Strand: +

Gemone reference: TAIR10

Genomic Sequence:
GGTCATACTTTTCCACAGCTTTCTTGAACTTTCTTTTTCATTTCCATTGTTTTTTTCTTAAACAAAAGTAAGAAGAAAAAAAACTTTAAGATTAAGCATTTTGGAAGCTCAAGAAAGCTGTGGGAAAACATGACA

Transcript Information:

Transcript Name: at5g35407

Sequence:
GGTCATACTTTTCCACAGCTTTCTTGAACTTTCTTTTTCATTTCCATTGTTTTTTTCTTAAACAAAAGTAAGAAGAAAAAAAACTTTAAGATTAAGCATTTTGGAAGCTCAAGAAAGCTGTGGGAAAACATGACA

sORF Information:

Expression:

Ignore zero expression

Mean TPM: 0.44428902612996185

Standard Deviation:2.1958031484994587

Co-Expression:

Gene	Pearson Correlation	Adjacency	TOM Similarity
ath_circ_025773	0.687725542133424	0.0500404532508261	0.094616812964497
ath_circ_024510	0.67643884463708	0.0438357370077539	0.091032161846291
AT2G28056	0.623187016228266	0.0227482070100654	0.096948497665731
AT1G09687	0.607210581120844	0.0184805395694527	0.0264496257910814
AT2G22496	0.589317673672306	0.0145477465589937	0.0702801600576443
AT3G05985	0.577942900988935	0.0124474235750819	0.0182004144735686
AT5G25180	0.569925887690604	0.0111313304269801	0.0121857554252056
AT1G36060	0.569694223384565	0.0110951844472761	0.00856937571265219
AT3G16770	0.568082655364285	0.010846565349899	0.0228606113189366
AT1G09420	0.559861236056561	0.00965257509778107	0.0161826448009692
AT5G24735	0.552241906614973	0.0086503738730828	0.0143777540119436
ath_circ_048529	0.551995949508011	0.00861960029700866	0.0577794971031119
AT1G73790	0.546752627213709	0.00798595812165854	0.0109818847798486
ath_circ_012319	0.542925979423962	0.00754961817929158	0.0822672754405027
ath_circ_024486	0.542925979423962	0.00754961817929158	0.0822672754405027
ath_circ_025777	0.542925979423962	0.00754961817929158	0.0822672754405027
AT1G76490	0.53982075453327	0.00721101872293342	0.015365330195825
ath_circ_025306	0.538176448976216	0.00703716137337891	0.0773822604418508
AT3G05937	0.534581835067678	0.00666981180077051	0.011250633263024
AT5G21020	0.531777109401164	0.0063949493912477	0.0133019755151017