AthRiboNC - miRNA: ath-MIR166f

ncRNA Name: ath-MIR166f

Parent Gene: AT5G43603

Chromosome: 5

Start: 17516301

End: 17516405

Strand: +

Gemone reference: TAIR10

Genomic Sequence:
AAGTTCAGGTGAATGATGCCTGGCTCGAGACCATTCAATCTCATGATCTCATGATTATAACGATGATGATGATGATGTCGGACCAGGCTTCATTCCCCTCAACTT

Transcript Name: at5g43603

Sequence:
AAGTTCAGGTGAATGATGCCTGGCTCGAGACCATTCAATCTCATGATCTCATGATTATAACGATGATGATGATGATGTCGGACCAGGCTTCATTCCCCTCAACTT

Start Codon:

ATG

non-ATG

Predicted by ORFfinder based on sequence information:

Transcript	Start	End	Start Codon	Peptide Length	Sequence
at5g43603	13	54	ATG	13

Detected by RiboTish based on sequence information and Ribo-seq data:

No sORF detected by RiboTish

Ignore zero expression

Mean TPM: 0.7570656173168488

Standard Deviation:3.9794950389258292

Gene	Pearson Correlation	Adjacency	TOM Similarity
ath_circ_011790	0.63799283028338	0.0274489910394396	0.0272672763919949
ath_circ_011589	0.63689166543922	0.0270722607841326	0.0334667128754712
AT1G30135	0.619008075663547	0.0215561163660573	0.0534845896953465
AT3G07515	0.601987963021721	0.0172465590488782	0.00996582321753754
ath_circ_051263	0.597528460556485	0.0162505762606252	0.0158083123884317
ath_circ_024529	0.594474218804133	0.0155978305797447	0.0284953212586162
AT2G01300	0.583583734145444	0.01345319473435	0.0442013391813388
AT5G00855	0.574882106416457	0.0119297221614614	0.0198989443747409
AT4G28085	0.574190180094647	0.0118153362796571	0.0149021800868265
AT5G64890	0.564373979969034	0.0102928551684923	0.00686620905857668
AT5G02600	0.563722682264274	0.0101982129791668	0.0183317972545811
AT1G13520	0.556692639945452	0.00922409646573414	0.028221394800588
AT5G17650	0.554289521330813	0.0089103209528222	0.0129503802071438
AT3G48450	0.55122068098741	0.00852322643370709	0.00520896462484473
AT2G01340	0.550534327252325	0.00843869379378181	0.0110909256974665
AT3G15440	0.547793073038052	0.00810834631690451	0.0152832770676145
ath_circ_024906	0.546332249816294	0.00793696929644955	0.0678320659742973
ath_circ_012116	0.545779354380658	0.00787293790297778	0.0480654604789488
AT3G49130	0.54481451215968	0.00776228060720963	0.0316772061844797
AT3G15500	0.54029791305941	0.00726216848327327	0.0272181355728274