RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Compound ID	OSC1531
Common Name	ATP
Synonyms Names	Adenosine 5'-triphosphate
Formula	C10H16N5O13P3
Formula at pH 7.2 (Predicted)	C10H12N5O13P3^4-
Molecular Weight	507.181
Structure
SMILES	NC1=NC=NC2=C1N=C[N]2C3OC(CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)C(O)C3O
Reactions	OSR0730 OSR0792 OSR0801 OSR0818 OSR0840 OSR0853 OSR0902 OSR0908 OSR0909 OSR0912 OSR0927 OSR0935 OSR0975 OSR0976 OSR0995 OSR1001 OSR1005 OSR1010 OSR1011 OSR1014 OSR1016 OSR1023 OSR1040 OSR1054 OSR1070 OSR1071 OSR1083 OSR1089 OSR1097 OSR1101 OSR1109 OSR1113 OSR1115 OSR1117 OSR1120 OSR1121 OSR1130 OSR1135 OSR1144 OSR1149 OSR1154 OSR1163 OSR1164 OSR1170 OSR1173 OSR1175 OSR1179 OSR1181 OSR1184 OSR1190 OSR1192 OSR1193 OSR1194 OSR1196 OSR1198 OSR1199 OSR1200 OSR1202 OSR1204 OSR1206 OSR1209 OSR1210 OSR1215 OSR1222 OSR1234 OSR1242 OSR1263 OSR1269 OSR1283 OSR1289 OSR1296 OSR1310 OSR1315 OSR1316 OSR1320 OSR1321 OSR1324 OSR1326 OSR1353 OSR1361 OSR1370 OSR1377 OSR1378 OSR1382 OSR1388 OSR1391 OSR1397 OSR1407 OSR1414 OSR1415 OSR1431 OSR1433 OSR1445 OSR1449 OSR1453 OSR1457 OSR1460 OSR1464 OSR1467 OSR1468 OSR1469 OSR1481 OSR1482 OSR1487 OSR1488 OSR1489 OSR1495 OSR1496 OSR1500 OSR1508 OSR1514 OSR1517 OSR1518 OSR1526 OSR1528 OSR1530 OSR1531 OSR1532 OSR1533 OSR1540 OSR1542 OSR1544 OSR1545 OSR1546 OSR1556 OSR1571 OSR1573 OSR1578 OSR1581 OSR1582 OSR1583 OSR1589 OSR1599 OSR1608 OSR1623 OSR1628 OSR1632 OSR1659 OSR1662 OSR1664 OSR1684 OSR1689 OSR1714 OSR1715 OSR1735 OSR1751 OSR1757 OSR1780 OSR1783 OSR1788 OSR1833 OSR1851 OSR1926 OSR1944 OSR1963 OSR1985 OSR1996 OSR1997 OSR2000 OSR2003 OSR2028 OSR2036 OSR2038 OSR2039 OSR2041 OSR2044 OSR2047 OSR2100 OSR2105 OSR2137 OSR2164 OSR2176 OSR2203 OSR2209 OSR2218 OSR2222 OSR2227 OSR2257 OSR2268 OSR2270 OSR2279 OSR2286 OSR2291 OSR2292 OSR2341 OSR2343 OSR2352 OSR2354 OSR2363 OSR2380 OSR2395 OSR2400 OSR2405 OSR2423 OSR2443 OSR2463 OSR2466 OSR2472 OSR2485 OSR2489 OSR2500 OSR2514 OSR2518 OSR2522 OSR2528 OSR2536 OSR2538 OSR2540 OSR2542 OSR2543 OSR2544 OSR2545 OSR2554 OSR2556 OSR2579 OSR2580 OSR2585 OSR2590 OSR2591 OSR2598 OSR2602 OSR2603 OSR2604 OSR2624 OSR2631 OSR2637 OSR2638 OSR2660 OSR2663 OSR2675 OSR2684 OSR2686 OSR2691 OSR2694 OSR2695 OSR2701 OSR2708 OSR2709 OSR2710 OSR2715 OSR2717 OSR2718 OSR2728 OSR2729 OSR2732 OSR2736 OSR2737 OSR2740 OSR2742 OSR2744 OSR2747 OSR2748 OSR2752 OSR2756 OSR2761 OSR2766 OSR2767 OSR2776 OSR2778 OSR2780 OSR2789 OSR2795 OSR2807 OSR2810 OSR2837 OSR2847 OSR2863 OSR2873 OSR2883 OSR2901 OSR2928 OSR2933 OSR2941 OSR2942 OSR2943 OSR2950 OSR2966 OSR2998 OSR3003 OSR3021 OSR3048

Pathways
KEGG	rn00230 rn00680 rn01100 rn00190 rn00195 rn00920 rn01120 rn00450 rn00620 rn00640 rn00564 rn00010 rn00020 rn00710 rn01110 rn00561 rn00260 rn00630 rn00030 rn00730 rn00520 rn00040 rn00750 rn00400 rn00900 rn00300 rn00270 rn00051 rn00790 rn00330 rn01210 rn00052 rn00500 rn00521 rn00524 rn00908 rn00983 rn00240 rn00562 rn00250 rn00770 rn00760 rn00340 rn00785 rn00480 rn00740 rn00600 rn00670 rn00720 rn00910 rn00860 rn00410 rn00970 rn00280 rn00940 rn00071 rn00592 rn00130 rn00360
Metacyc	PWY-6126 SO4ASSIM-PWY PWY-5278 SULFMETII-PWY PWY-5340 PWY-6683 DISSULFRED-PWY P224-PWY CITRULLINE-DEG-PWY P185-PWY GLUCONEO-PWY GLYCOLATEMET-PWY PWY-181 P23-PWY GLYCOLYSIS PWY0-381 PWY-4261 PWY-702 HOMOSER-THRESYN-PWY PEPTIDOGLYCANSYN-PWY ASPARAGINESYN-PWY RIBOKIN-PWY XYLCAT-PWY PYRIDOXAMINE ANABOLISM PLPSAL-PWY PHOSLIPSYN2-PWY ARO-PWY PWY-922 PWY-5041 ETHYL-PWY SAM-PWY PWY-4361 METHIONINE-DEG1-PWY FOLSYN-PWY PWY-3742 ARGSYNBSUB-PWY GLUTORN-PWY PWY-3821 GALACTMETAB-PWY ANAEROFRUCAT-PWY PWY-621 SUCUTIL-PWY PWY-3801 P122-PWY PWY-5384 THISYN-PWY MANGDPMET-PWY MANNCAT-PWY PWY-842 P124-PWY PWY-6693 PWY-6531 IDNCAT-PWY PWY-2681 PWY0-181 PWY-1042 PWY-622 GLYCOGENSYNTH-PWY PWY-6361 PWY-6554 PWY-6366 PWY0-162 ARGSYN-PWY PWY-5043 COA-PWY P1-PWY HISTSYN-PWY PWY0-166 DENOVOPURINE2-PWY PWY-841 PWY-3841 PWY-2161 PWY-6125 PWY-6362 PWY-6365 NAD BIOSYNTHESIS II PWY-5 1CMET2-PWY PWY0-163 PWY0-522 GLUTATHIONESYN-PWY PWY-4983 PWY-4984 ARGININE-SYN4-PWY PWY-6352 PWY-6351 PWY-4661 RIBOSYN2-PWY PPGPPMET-PWY PWY-2201 NONMEVIPP-PWY ANARESP1-PWY FERMENTATION-PWY PWY-6545 PWY-5687 PWY-3282 GLNSYN-PWY PWY-6549 PWY-381 PWY-5675 PWY490-3 DAPLYSINESYN-PWY PWY-5097 PWY-2941 HOMOSERSYN-PWY P101-PWY PWY-2942 PWY-6562 PWY-6559 CALVIN-PWY PWY-241 PWY-6240 PROSYN-PWY PROLINE-SYN2-PWY CITRULBIO-PWY PWY0-662 CHLOROPHYLL-SYN PWY-3921 PANTO-PWY ASPARAGINE-BIOSYNTHESIS PWY-5143 PWY-5136 FAO-PWY GLUDEG-II-PWY PWY66-21 PWY66-162 PYRIDNUCSYN-PWY PYRIDNUCSAL-PWY PWY-5381 TRNA-CHARGING-PWY LEU-DEG2-PWY PWY-1121 PWY0-901 PWY-2161B PWY-5188 PWY0-1264 PWY-5083 PWY1F-FLAVSYN PWY-361 PWY-5754 PWY-6435 PWY-6673 PWY-6320 PWY-5135 NAGLIPASYN-PWY

Pathways

KEGG

rn00230  rn00680  rn01100  rn00190  rn00195  rn00920  rn01120
rn00450  rn00620  rn00640  rn00564  rn00010  rn00020  rn00710
rn01110  rn00561  rn00260  rn00630  rn00030  rn00730  rn00520
rn00040  rn00750  rn00400  rn00900  rn00300  rn00270  rn00051
rn00790  rn00330  rn01210  rn00052  rn00500  rn00521  rn00524
rn00908  rn00983  rn00240  rn00562  rn00250  rn00770  rn00760
rn00340  rn00785  rn00480  rn00740  rn00600  rn00670  rn00720
rn00910  rn00860  rn00410  rn00970  rn00280  rn00940  rn00071
rn00592  rn00130  rn00360

Metacyc

PWY-6126  SO4ASSIM-PWY  PWY-5278  SULFMETII-PWY
PWY-5340  PWY-6683  DISSULFRED-PWY  P224-PWY
CITRULLINE-DEG-PWY  P185-PWY  GLUCONEO-PWY  GLYCOLATEMET-PWY
PWY-181  P23-PWY  GLYCOLYSIS  PWY0-381
PWY-4261  PWY-702  HOMOSER-THRESYN-PWY  PEPTIDOGLYCANSYN-PWY
ASPARAGINESYN-PWY  RIBOKIN-PWY  XYLCAT-PWY  PYRIDOXAMINE ANABOLISM
PLPSAL-PWY  PHOSLIPSYN2-PWY  ARO-PWY  PWY-922
PWY-5041  ETHYL-PWY  SAM-PWY  PWY-4361
METHIONINE-DEG1-PWY  FOLSYN-PWY  PWY-3742  ARGSYNBSUB-PWY
GLUTORN-PWY  PWY-3821  GALACTMETAB-PWY  ANAEROFRUCAT-PWY
PWY-621  SUCUTIL-PWY  PWY-3801  P122-PWY
PWY-5384  THISYN-PWY  MANGDPMET-PWY  MANNCAT-PWY
PWY-842  P124-PWY  PWY-6693  PWY-6531
IDNCAT-PWY  PWY-2681  PWY0-181  PWY-1042
PWY-622  GLYCOGENSYNTH-PWY  PWY-6361  PWY-6554
PWY-6366  PWY0-162  ARGSYN-PWY  PWY-5043
COA-PWY  P1-PWY  HISTSYN-PWY  PWY0-166
DENOVOPURINE2-PWY  PWY-841  PWY-3841  PWY-2161
PWY-6125  PWY-6362  PWY-6365  NAD BIOSYNTHESIS II
PWY-5  1CMET2-PWY  PWY0-163  PWY0-522
GLUTATHIONESYN-PWY  PWY-4983  PWY-4984  ARGININE-SYN4-PWY
PWY-6352  PWY-6351  PWY-4661  RIBOSYN2-PWY
PPGPPMET-PWY  PWY-2201  NONMEVIPP-PWY  ANARESP1-PWY
FERMENTATION-PWY  PWY-6545  PWY-5687  PWY-3282
GLNSYN-PWY  PWY-6549  PWY-381  PWY-5675
PWY490-3  DAPLYSINESYN-PWY  PWY-5097  PWY-2941
HOMOSERSYN-PWY  P101-PWY  PWY-2942  PWY-6562
PWY-6559  CALVIN-PWY  PWY-241  PWY-6240
PROSYN-PWY  PROLINE-SYN2-PWY  CITRULBIO-PWY  PWY0-662
CHLOROPHYLL-SYN  PWY-3921  PANTO-PWY  ASPARAGINE-BIOSYNTHESIS
PWY-5143  PWY-5136  FAO-PWY  GLUDEG-II-PWY
PWY66-21  PWY66-162  PYRIDNUCSYN-PWY  PYRIDNUCSAL-PWY
PWY-5381  TRNA-CHARGING-PWY  LEU-DEG2-PWY  PWY-1121
PWY0-901  PWY-2161B  PWY-5188  PWY0-1264
PWY-5083  PWY1F-FLAVSYN  PWY-361  PWY-5754
PWY-6435  PWY-6673  PWY-6320  PWY-5135
NAGLIPASYN-PWY

Database Links
KEGG	C00002
ChEBI	15422