RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

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Example: LOC_Os01g49190      


Nucleus has 17647 entries
Cytosol has 14819 entries

Peroxisome has 361 entries
Mitochondrion has 15280 entries

Golgi apparatus has 154 entries
Chloroplast has 19928 entries

Plasma membrane has 7511 entries
ER has 596 entries

Vacuole has 1303 entries
Extracellular matrix has 5145 entries

Citation: Lili Liu, Qian Mei, Zhenning Yu, Tianhao Sun, Zijun Zhang, Ming Chen* (2013) An Integrative Bioinformatics Framework for Genome-scale Multiple Level Network Reconstruction of Rice. Journal of Integrative Bioinformatics, 10(2): 223.
Contact: mchen@zju.edu.cn; llliu@zju.edu.cn
© since 2011 Ming Chen's Lab, Zhejiang University