RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g01369.1 View Network Show in Genome Browser |
| Other Names | Os01g0103600 |
| Description | 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 186246-190846 Nucleotide Length: 660 |
| Protein-coding | LOC_Os01g01369 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os02g36974 LOC_Os03g56300 LOC_Os07g38970 LOC_Os03g38520 LOC_Os09g19734 LOC_Os09g32800 LOC_Os03g05260 LOC_Os02g21250 LOC_Os02g01450 LOC_Os02g48720 LOC_Os05g38630 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00100 rn01100 rn01110 |
| Metacyc Pathways | PWY66-341 PWY66-4 PWY-2541 PWY66-3 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g01369.1 |
| Rice Genome Annotation | LOC_Os01g01369.1 |
| Ricechip | LOC_Os01g01369.1 |
| KEGG | osa:4326449 dosa:Os01t0103600-02 |
| Entrez-Gene | 4326449 |