RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g01790.1 View Network Show in Genome Browser |
| Other Names | Os01g0107900 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 416241-420497 Nucleotide Length: 1884 |
| Protein-coding | LOC_Os01g01790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os01g70820 LOC_Os07g05820 LOC_Os10g32870 LOC_Os04g16680 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g01790.1 |
| Rice Genome Annotation | LOC_Os01g01790.1 |
| Ricechip | LOC_Os01g01790.1 |
| KEGG | osa:4326159 dosa:Os01t0107900-01 |
| Entrez-Gene | 4326159 |