RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g01960.1 View Network Show in Genome Browser |
| Other Names | Os01g0109700 |
| Description | transcriptional repressor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 513890-522448 Nucleotide Length: 3978 |
| Protein-coding | LOC_Os01g01960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os01g68680 LOC_Os06g38470 LOC_Os07g41090 LOC_Os04g57340 LOC_Os07g38950 LOC_Os03g43890 LOC_Os05g29710 LOC_Os02g37000 LOC_Os01g65580 LOC_Os03g31500 LOC_Os04g01970 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g01960.1 |
| Rice Genome Annotation | LOC_Os01g01960.1 |
| Ricechip | LOC_Os01g01960.1 |
| KEGG | osa:4326133 dosa:Os01t0109700-01 |
| Entrez-Gene | 4326133 |