RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g02080.1 View Network Show in Genome Browser |
| Other Names | Os01g0111100 |
| Description | peptidyl-prolyl cis-trans isomerase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 586414-587780 Nucleotide Length: 915 |
| Protein-coding | LOC_Os01g02080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os11g38990 LOC_Os03g61030 LOC_Os08g29370 LOC_Os03g22780 LOC_Os07g37830 LOC_Os07g29390 LOC_Os06g04000 LOC_Os03g59700 LOC_Os03g01090 LOC_Os01g40050 LOC_Os03g15870 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g02080.1 |
| Rice Genome Annotation | LOC_Os01g02080.1 |
| Ricechip | LOC_Os01g02080.1 |
| KEGG | osa:4326140 dosa:Os01t0111100-01 |
| Entrez-Gene | 4326140 |