RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g03020.2 View Network Show in Genome Browser |
| Other Names | Os01g0120300 |
| Description | tRNA synthetase class I, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 1147218-1155086 Nucleotide Length: 2502 |
| Protein-coding | LOC_Os01g03020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os09g21110 LOC_Os03g11120 LOC_Os09g32650 LOC_Os12g13824 LOC_Os02g50560 LOC_Os01g04900 LOC_Os02g52390 LOC_Os12g35570 LOC_Os01g54020 LOC_Os01g31610 LOC_Os06g35470 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g03020.2 |
| Rice Genome Annotation | LOC_Os01g03020.2 |
| Ricechip | LOC_Os01g03020.2 |
| KEGG | osa:4326033 dosa:Os01t0120300-00 |
| Entrez-Gene | 4326033 |