RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g03144.1 View Network Show in Genome Browser |
| Other Names | Os01g0121700,Os01g0121600 |
| Description | white-brown complex homolog protein 7, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 1222905-1230507 Nucleotide Length: 2007 |
| Protein-coding | LOC_Os01g03144 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os09g16380 LOC_Os02g32690 LOC_Os01g42410 LOC_Os01g42380 LOC_Os01g24010 LOC_Os01g42350 LOC_Os01g42370 LOC_Os02g11760 LOC_Os12g13720 LOC_Os04g40730 LOC_Os10g30090 More.. |
| Reference | |
|---|---|
| PubMed | 22996334 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g03144.1 |
| Rice Genome Annotation | LOC_Os01g03144.1 |
| Ricechip | LOC_Os01g03144.1 |
| KEGG | osa:4326045 osa:4326044 dosa:Os01t0121700-01dosa:Os01t0121600-01 |
| Entrez-Gene | 43260454327143 |