RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g03710.1 View Network Show in Genome Browser |
| Other Names | Os01g0127900 |
| Description | mannose-6-phosphate isomerase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 1534135-1539627 Nucleotide Length: 1287 |
| Protein-coding | LOC_Os01g03710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os03g13800 LOC_Os06g16260 LOC_Os03g38980 LOC_Os05g23260 LOC_Os02g51430 LOC_Os10g08879 LOC_Os03g14170 LOC_Os03g21950 LOC_Os01g40570 LOC_Os02g44690 LOC_Os03g54780 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00051 rn00520 rn01100 rn01110 |
| Metacyc Pathways | PWY-882 MANGDPMET-PWY MANNCAT-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g03710.1 |
| Rice Genome Annotation | LOC_Os01g03710.1 |
| Ricechip | LOC_Os01g03710.1 |
| KEGG | osa:4325991 dosa:Os01t0127900-01 |
| Entrez-Gene | 4325991 |