RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g04110.1 View Network Show in Genome Browser |
| Other Names | Os01g0132700 |
| Description | mediator of RNA polymerase II transcription subunit 22, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 1787870-1791498 Nucleotide Length: 447 |
| Protein-coding | LOC_Os01g04110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os08g24400 LOC_Os09g35920 LOC_Os10g42950 LOC_Os09g10960 LOC_Os01g63580 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5082 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g04110.1 |
| Rice Genome Annotation | LOC_Os01g04110.1 |
| Ricechip | LOC_Os01g04110.1 |
| KEGG | osa:4325800 dosa:Os01t0132700-01 |
| Entrez-Gene | 4325800 |