RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g04650.1 View Network Show in Genome Browser |
| Other Names | Os01g0139200 |
| Description | PB1 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 2083681-2087226 Nucleotide Length: 2016 |
| Protein-coding | LOC_Os01g04650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os09g38390 LOC_Os09g04990 LOC_Os12g07190 LOC_Os01g69900 LOC_Os11g16290 LOC_Os09g37710 LOC_Os03g03900 LOC_Os01g13540 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2101-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g04650.1 |
| Rice Genome Annotation | LOC_Os01g04650.1 |
| Ricechip | LOC_Os01g04650.1 |
| KEGG | osa:4325473 dosa:Os01t0139200-01 |
| Entrez-Gene | 4325473 |