RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g04720.1 View Network Show in Genome Browser |
| Other Names | Os01g0140400 |
| Description | leucine-rich repeat protein-related, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 2130798-2137310 Nucleotide Length: 1917 |
| Protein-coding | LOC_Os01g04720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os01g09860 LOC_Os03g01550 LOC_Os05g01810 LOC_Os07g02810 LOC_Os05g46550 LOC_Os05g04820 LOC_Os03g08790 LOC_Os07g01860 LOC_Os02g09930 LOC_Os03g14610 LOC_Os01g68589 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1428b osa-miR1428c osa-miR1428d |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g04720.1 |
| Rice Genome Annotation | LOC_Os01g04720.1 |
| Ricechip | LOC_Os01g04720.1 |
| KEGG | osa:4325477 dosa:Os01t0140400-02 |
| Entrez-Gene | 4325477 |