RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g04800.1 View Network Show in Genome Browser |
| Other Names | Os01g0141000 |
| Description | B3 DNA binding domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 2202264-2203860 Nucleotide Length: 1098 |
| Protein-coding | LOC_Os01g04800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os03g18600 LOC_Os02g39140 LOC_Os04g41229 LOC_Os07g42510 LOC_Os02g52620 LOC_Os11g12340 LOC_Os05g07420 LOC_Os02g46860 LOC_Os02g46850 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g04800.1 |
| Rice Genome Annotation | LOC_Os01g04800.1 |
| Ricechip | LOC_Os01g04800.1 |
| KEGG | osa:4325479 dosa:Os01t0141000-01 |
| Entrez-Gene | 4325479 |