RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g04870.1 View Network Show in Genome Browser |
| Other Names | Os01g0141700 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 2250820-2255073 Nucleotide Length: 1752 |
| Protein-coding | LOC_Os01g04870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g03090 |
| Downstream Genes | LOC_Os05g51480 LOC_Os08g33082 LOC_Os03g10780 LOC_Os01g49680 LOC_Os04g42990 LOC_Os02g58220 LOC_Os05g05260 LOC_Os06g38470 LOC_Os05g32600 LOC_Os10g37490 LOC_Os03g52750 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g04870.1 |
| Rice Genome Annotation | LOC_Os01g04870.1 |
| Ricechip | LOC_Os01g04870.1 |
| KEGG | osa:4325482 dosa:Os01t0141700-01 |
| Entrez-Gene | 4325482 |