RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g04900.2 View Network Show in Genome Browser |
| Other Names | Os01g0142100 |
| Description | peptidase M50 family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 2265477-2271051 Nucleotide Length: 1434 |
| Protein-coding | LOC_Os01g04900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g03020 |
| Downstream Genes | LOC_Os03g38230 LOC_Os01g46590 LOC_Os03g62780 LOC_Os08g24390 LOC_Os03g36540 LOC_Os01g05080 LOC_Os03g61220 LOC_Os07g34950 LOC_Os11g27329 LOC_Os11g27264 LOC_Os10g01110 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g04900.2 |
| Rice Genome Annotation | LOC_Os01g04900.2 |
| Ricechip | LOC_Os01g04900.2 |
| KEGG | osa:4325486 dosa:Os01t0142100-01 |
| Entrez-Gene | 4325486 |