RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g05080.1 View Network Show in Genome Browser |
| Other Names | Os01g0144100 |
| Description | thylakoid lumenal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 2383530-2385638 Nucleotide Length: 597 |
| Protein-coding | LOC_Os01g05080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g04900 |
| Downstream Genes | LOC_Os03g34040 LOC_Os01g28540 LOC_Os05g50330 LOC_Os03g14040 LOC_Os04g53490 LOC_Os12g29760 LOC_Os09g30410 LOC_Os02g38240 LOC_Os11g27329 LOC_Os11g27264 LOC_Os10g01110 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g05080.1 |
| Rice Genome Annotation | LOC_Os01g05080.1 |
| Ricechip | LOC_Os01g05080.1 |
| KEGG | osa:4325465 dosa:Os01t0144100-01 |
| Entrez-Gene | 4325465 |