RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g05694.1 View Network Show in Genome Browser |
| Other Names | Os01g0150200 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 2719212-2720873 Nucleotide Length: 555 |
| Protein-coding | LOC_Os01g05694 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0040007 | growth | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g05670 |
| Downstream Genes | LOC_Os01g15260 LOC_Os01g05710 LOC_Os01g61240 LOC_Os06g46372 LOC_Os03g02680 LOC_Os03g01850 LOC_Os03g52400 LOC_Os11g11050 LOC_Os11g20790 LOC_Os03g63110 LOC_Os02g21650 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00061 rn01040 |
| Metacyc Pathways | PWY-5061 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g05694.1 |
| Rice Genome Annotation | LOC_Os01g05694.1 |
| Ricechip | LOC_Os01g05694.1 |
| KEGG | osa:4324518 dosa:Os01t0150200-01 |
| Entrez-Gene | 4324518 |