RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g06020.1 View Network Show in Genome Browser |
| Other Names | Os01g0153400 |
| Description | aspartyl-tRNA synthetase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 2877647-2882686 Nucleotide Length: 1149 |
| Protein-coding | LOC_Os01g06020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os02g42230 LOC_Os03g25130 LOC_Os02g53680 LOC_Os03g38980 LOC_Os03g03360 LOC_Os02g51830 LOC_Os05g05840 LOC_Os03g11540 LOC_Os01g27520 LOC_Os08g35620 LOC_Os02g58220 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00970 |
| Metacyc Pathways | TRNA-CHARGING-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g06020.1 |
| Rice Genome Annotation | LOC_Os01g06020.1 |
| Ricechip | LOC_Os01g06020.1 |
| KEGG | osa:4324505 dosa:Os01t0153400-01 |
| Entrez-Gene | 4324505 |