RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g06580.1 View Network Show in Genome Browser |
| Other Names | Os01g0159200 |
| Description | fasciclin domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 3097346-3098527 Nucleotide Length: 810 |
| Protein-coding | LOC_Os01g06580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os05g48270 LOC_Os12g13160 LOC_Os03g57460 LOC_Os05g41990 LOC_Os01g62490 LOC_Os03g06350 LOC_Os03g13460 LOC_Os10g10080 LOC_Os02g19640 LOC_Os07g01370 LOC_Os05g07060 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g06580.1 |
| Rice Genome Annotation | LOC_Os01g06580.1 |
| Ricechip | LOC_Os01g06580.1 |
| KEGG | osa:4324060 dosa:Os01t0159200-01 |
| Entrez-Gene | 4324060 |