RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g06660.1 View Network Show in Genome Browser |
| Other Names | Os01g0160100 |
| Description | thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 3136104-3140217 Nucleotide Length: 1794 |
| Protein-coding | LOC_Os01g06660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Pathways | |
|---|---|
| KEGG Pathways | rn01110 rn00010 rn01100 rn00290 rn00660 rn01210 |
| Metacyc Pathways | PWY-3801 PWY-6333 PWY-6330 PWY3O-440 PWY-5076 PWY-5768 PWY-5486 PWY-5057 VALSYN-PWY ILEUSYN-PWY GLYCOLATEMET-PWY PWY0-41 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g06660.1 |
| Rice Genome Annotation | LOC_Os01g06660.1 |
| Ricechip | LOC_Os01g06660.1 |
| KEGG | osa:4324066 dosa:Os01t0160100-01 |
| Entrez-Gene | 4324066 |