RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g07760.1 View Network Show in Genome Browser |
| Other Names | Os01g0172400 |
| Description | phospholipase D, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 3724314-3729284 Nucleotide Length: 2439 |
| Protein-coding | LOC_Os01g07760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os07g26690 LOC_Os07g26630 LOC_Os05g26890 LOC_Os04g44060 LOC_Os02g41860 LOC_Os06g17870 LOC_Os12g41220 LOC_Os01g53140 LOC_Os03g19890 LOC_Os03g03770 LOC_Os05g01970 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00565 rn00564 rn01100 |
| Metacyc Pathways | PWY-3561 LIPASYN-PWY |
| Reference | |
|---|---|
| PubMed | 21205187 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g07760.1 |
| Rice Genome Annotation | LOC_Os01g07760.1 |
| Ricechip | LOC_Os01g07760.1 |
| KEGG | osa:4327647 dosa:Os01t0172400-02 |
| Entrez-Gene | 4327647 |