RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g07790.1 View Network Show in Genome Browser |
| Other Names | Os01g0172900 |
| Description | polygalacturonase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 3737893-3740685 Nucleotide Length: 1374 |
| Protein-coding | LOC_Os01g07790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009838 | abscission | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-1081 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g07790.1 |
| Rice Genome Annotation | LOC_Os01g07790.1 |
| Ricechip | LOC_Os01g07790.1 |
| KEGG | dosa:Os01t0172900-00 |