RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g08140.1 View Network Show in Genome Browser |
| Other Names | Os01g0176400 |
| Description | phototropic-responsive NPH3 family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 3937749-3938912 Nucleotide Length: 594 |
| Protein-coding | LOC_Os01g08140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os12g41650 LOC_Os03g04220 LOC_Os10g40720 LOC_Os12g41590 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g08140.1 |
| Rice Genome Annotation | LOC_Os01g08140.1 |
| Ricechip | LOC_Os01g08140.1 |
| KEGG | osa:4326222 dosa:Os01t0176400-01 |
| Entrez-Gene | 4326222 |