RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g08220.1 View Network Show in Genome Browser |
| Other Names | Os01g0177400 |
| Description | gibberellin 3-beta-dioxygenase 2-2, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 4003659-4004946 Nucleotide Length: 1122 |
| Protein-coding | LOC_Os01g08220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR531b osa-miR2926 |
| Pathways | |
|---|---|
| KEGG Pathways | rn01110 rn00904 rn01100 |
| Metacyc Pathways | PWY-5035 |
| Reference | |
|---|---|
| PubMed | 11438692 21911595 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g08220.1 |
| Rice Genome Annotation | LOC_Os01g08220.1 |
| Ricechip | LOC_Os01g08220.1 |
| KEGG | dosa:Os01t0177400-01 |
| Entrez-Gene | 4323864 |