RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g08330.1 View Network Show in Genome Browser |
| Other Names | Os01g0178600 |
| Description | aspartic proteinase nepenthesin-1 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 4081316-4082680 Nucleotide Length: 1365 |
| Protein-coding | LOC_Os01g08330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os08g36530 LOC_Os01g56930 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Reference | |
|---|---|
| PubMed | 20347986 19888828 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g08330.1 |
| Rice Genome Annotation | LOC_Os01g08330.1 |
| Ricechip | LOC_Os01g08330.1 |
| KEGG | dosa:Os01t0178600-00 |
| Entrez-Gene | 4323872 |