RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g08700.5 View Network Show in Genome Browser |
| Other Names | Os01g0182600 |
| Description | GIGANTEA, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 4329152-4338485 Nucleotide Length: 3483 |
| Protein-coding | LOC_Os01g08700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os07g49460 LOC_Os03g17570 LOC_Os09g27030 LOC_Os08g44510 LOC_Os11g03580 LOC_Os07g26940 LOC_Os11g13670 LOC_Os05g51150 LOC_Os03g01750 LOC_Os04g05010 LOC_Os05g25400 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2104 |
| Reference | |
|---|---|
| PubMed | 22101345 12700762 15055520 12040096 21571948 17951465 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g08700.5 |
| Rice Genome Annotation | LOC_Os01g08700.5 |
| Ricechip | LOC_Os01g08700.5 |
| KEGG | osa:4325329 dosa:Os01t0182600-01 |
| Entrez-Gene | 4325329 |