RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g09620.2 View Network Show in Genome Browser |
| Other Names | Os01g0192000 |
| Description | zinc finger/CCCH transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 4949132-4951126 Nucleotide Length: 1161 |
| Protein-coding | LOC_Os01g09620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os08g13320 LOC_Os10g32680 LOC_Os08g06330 LOC_Os06g49080 LOC_Os04g57600 LOC_Os01g61830 LOC_Os01g45730 LOC_Os01g42970 LOC_Os09g39560 LOC_Os01g43680 LOC_Os02g01720 More.. |
| Reference | |
|---|---|
| PubMed | 16778011 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g09620.2 |
| Rice Genome Annotation | LOC_Os01g09620.2 |
| Ricechip | LOC_Os01g09620.2 |
| KEGG | osa:4327304 dosa:Os01t0192000-01 |
| Entrez-Gene | 4327304 |