RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g09800.1 View Network Show in Genome Browser |
| Other Names | Os01g0194300 |
| Description | BTBA1 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 5060416-5065236 Nucleotide Length: 1749 |
| Protein-coding | LOC_Os01g09800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os04g54474 LOC_Os01g59350 LOC_Os01g17260 LOC_Os06g21330 LOC_Os06g04080 LOC_Os03g19200 LOC_Os02g53340 |
| Reference | |
|---|---|
| PubMed | 17309686 22694163 20924648 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g09800.1 |
| Rice Genome Annotation | LOC_Os01g09800.1 |
| Ricechip | LOC_Os01g09800.1 |
| KEGG | osa:4327315 dosa:Os01t0194300-01 |
| Entrez-Gene | 4327315 |