RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g09860.1 View Network Show in Genome Browser |
| Other Names | Os01g0195200 |
| Description | retrotransposon protein, putative, unclassified, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 5109949-5117013 Nucleotide Length: 3201 |
| Protein-coding | LOC_Os01g09860 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g04720 LOC_Os01g02040 LOC_Os01g09010 |
| Downstream Genes | LOC_Os02g05630 LOC_Os07g32380 LOC_Os06g48300 LOC_Os04g56450 LOC_Os02g15594 LOC_Os07g31840 LOC_Os03g18150 LOC_Os06g33549 LOC_Os05g46550 LOC_Os04g37904 LOC_Os01g54080 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5150-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g09860.1 |
| Rice Genome Annotation | LOC_Os01g09860.1 |
| Ricechip | LOC_Os01g09860.1 |
| KEGG | osa:4327321 dosa:Os01t0195200-01 |
| Entrez-Gene | 4327321 |