RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g10020.1 View Network Show in Genome Browser |
| Other Names | Os01g0196600 |
| Description | ectonucleotide pyrophosphatase/phosphodiesterase family member 1, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 5218542-5220398 Nucleotide Length: 1440 |
| Protein-coding | LOC_Os01g10020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os04g02900 LOC_Os10g08940 LOC_Os03g22690 LOC_Os02g37050 LOC_Os10g37660 LOC_Os11g07280 LOC_Os12g43830 LOC_Os06g11280 LOC_Os06g11240 LOC_Os06g11210 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g10020.1 |
| Rice Genome Annotation | LOC_Os01g10020.1 |
| Ricechip | LOC_Os01g10020.1 |
| KEGG | osa:4327327 dosa:Os01t0196600-01 |
| Entrez-Gene | 4327327 |