RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g10280.1 View Network Show in Genome Browser |
| Other Names | Os01g0199900 |
| Description | phosphoribosylaminoimidazole carboxylase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 5406007-5412769 Nucleotide Length: 1896 |
| Protein-coding | LOC_Os01g10280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08760 |
| Downstream Genes | LOC_Os08g10570 LOC_Os02g40830 LOC_Os01g65260 LOC_Os04g46930 LOC_Os02g57240 LOC_Os12g07590 LOC_Os02g38020 LOC_Os08g09210 LOC_Os03g52840 LOC_Os04g53230 LOC_Os05g35580 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn01100 rn01110 |
| Metacyc Pathways | PWY-841 PEPTIDOGLYCANSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g10280.1 |
| Rice Genome Annotation | LOC_Os01g10280.1 |
| Ricechip | LOC_Os01g10280.1 |
| KEGG | osa:4327345 dosa:Os01t0199900-01 |
| Entrez-Gene | 4327345 |