RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g11010.1 View Network Show in Genome Browser |
| Other Names | Os01g0208400 |
| Description | peptide-N4-asparagine amidase A, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 5875786-5877849 Nucleotide Length: 1851 |
| Protein-coding | LOC_Os01g11010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g02940 |
| Downstream Genes | LOC_Os03g12250 LOC_Os05g04820 LOC_Os01g73980 LOC_Os04g42620 LOC_Os05g48270 LOC_Os01g62490 LOC_Os05g01810 LOC_Os04g54810 LOC_Os07g45060 LOC_Os02g33550 LOC_Os12g01560 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g11010.1 |
| Rice Genome Annotation | LOC_Os01g11010.1 |
| Ricechip | LOC_Os01g11010.1 |
| KEGG | osa:4325529 dosa:Os01t0208400-01 |
| Entrez-Gene | 4325529 |