RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g11054.1 View Network Show in Genome Browser |
| Other Names | Os01g0208700 |
| Description | phosphoenolpyruvate carboxylase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 5899555-5909595 Nucleotide Length: 3045 |
| Protein-coding | LOC_Os01g11054 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os03g60976 LOC_Os03g60992 LOC_Os03g19280 LOC_Os11g43860 LOC_Os03g42110 LOC_Os10g35170 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00620 rn00680 rn00710 rn00720 rn01100 rn01120 |
| Metacyc Pathways | ANARESP1-PWY GLUCONEO-PWY FERMENTATION-PWY P23-PWY PWY-241 PWYQT-4429 PWY-1622 PWY-6142 PWY-6549 PWY-6146 PWY-5913 |
| Reference | |
|---|---|
| PubMed | 20194759 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g11054.1 |
| Rice Genome Annotation | LOC_Os01g11054.1 |
| Ricechip | LOC_Os01g11054.1 |
| KEGG | osa:4325531 dosa:Os01t0208700-01 |
| Entrez-Gene | 4325531 |