RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os01g11550.1 View Network Show in Genome Browser
Other Names	Os01g0213800
Description	TCP family transcription factor, putative, expressed
Gene Attributes	Chromosome: Chr1 CDS Coordinates (5'-3'): 6221636-6224329 Nucleotide Length: 1377
Protein-coding	LOC_Os01g11550

Gene Ontology Classification
GO	Name	Type	Code
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0008150	biological_process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0030154	cell differentiation	Biological Process	IEA
GO:0009790	embryo development	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function	IEA
GO:0005575	cellular_component	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Downstream Genes	LOC_Os12g07480 LOC_Os08g43160 LOC_Os04g44440 LOC_Os02g51280 LOC_Os02g42380 LOC_Os01g69980 LOC_Os12g29580 LOC_Os03g19780 LOC_Os04g41140

miRNA Regulations
miRNAs	osa-miR5075 osa-miR319a-3p.2-3p osa-miR319b

Database Links
Gramene	LOC_Os01g11550.1
Rice Genome Annotation	LOC_Os01g11550.1
Ricechip	LOC_Os01g11550.1
KEGG	osa:4325252 dosa:Os01t0213800-01
Entrez-Gene	4325252