RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g11952.1 View Network Show in Genome Browser |
| Other Names | Os01g0218800 |
| Description | histone-lysine N-methyltransferase ATX5, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 6507356-6514891 Nucleotide Length: 2976 |
| Protein-coding | LOC_Os01g11952 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g01420 |
| Downstream Genes | LOC_Os02g03030 LOC_Os01g73460 LOC_Os08g02690 LOC_Os12g13460 LOC_Os08g14660 LOC_Os08g10470 LOC_Os07g28840 LOC_Os06g03676 LOC_Os05g50980 LOC_Os04g53700 LOC_Os02g50100 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g11952.1 |
| Rice Genome Annotation | LOC_Os01g11952.1 |
| Ricechip | LOC_Os01g11952.1 |
| KEGG | osa:4324588 dosa:Os01t0218800-01 |
| Entrez-Gene | 4324588 |