RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g12070.1 View Network Show in Genome Browser |
| Other Names | Os01g0220100 |
| Description | endoglucanase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 6564673-6568151 Nucleotide Length: 1923 |
| Protein-coding | LOC_Os01g12070 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0030246 | carbohydrate binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os06g42020 LOC_Os10g19880 LOC_Os03g62090 LOC_Os05g39990 LOC_Os07g14850 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 rn01100 |
| Metacyc Pathways | PWY-1001 |
| Reference | |
|---|---|
| PubMed | 17056619 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g12070.1 |
| Rice Genome Annotation | LOC_Os01g12070.1 |
| Ricechip | LOC_Os01g12070.1 |
| KEGG | osa:4324643 dosa:Os01t0220100-01 |
| Entrez-Gene | 4324643 |