RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g12530.2 View Network Show in Genome Browser |
| Other Names | Os01g0225100 |
| Description | smr domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 6889351-6896414 Nucleotide Length: 1707 |
| Protein-coding | LOC_Os01g12530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os05g38520 LOC_Os01g62350 LOC_Os02g02770 LOC_Os03g11670 LOC_Os12g44170 LOC_Os12g37550 LOC_Os04g52290 LOC_Os03g60910 LOC_Os08g08220 LOC_Os05g11770 LOC_Os02g04490 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR160d-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g12530.2 |
| Rice Genome Annotation | LOC_Os01g12530.2 |
| Ricechip | LOC_Os01g12530.2 |
| KEGG | osa:4326736 dosa:Os01t0225100-01 |
| Entrez-Gene | 4326736 |