RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g12860.1 View Network Show in Genome Browser |
| Other Names | Os01g0229000 |
| Description | MYB family transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 7115771-7124102 Nucleotide Length: 2919 |
| Protein-coding | LOC_Os01g12860 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os08g25130 LOC_Os12g16210 LOC_Os09g11270 LOC_Os10g06700 LOC_Os10g42660 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g12860.1 |
| Rice Genome Annotation | LOC_Os01g12860.1 |
| Ricechip | LOC_Os01g12860.1 |
| KEGG | osa:4327192 dosa:Os01t0229000-00 |
| Entrez-Gene | 4327192 |