RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g12890.1 View Network Show in Genome Browser |
| Other Names | Os01g0229300 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 7157780-7164385 Nucleotide Length: 3174 |
| Protein-coding | LOC_Os01g12890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR160a-3p osa-miR160b-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g12890.1 |
| Rice Genome Annotation | LOC_Os01g12890.1 |
| Ricechip | LOC_Os01g12890.1 |
| KEGG | osa:4325878 dosa:Os01t0229300-01 |
| Entrez-Gene | 4325878 |