RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g13270.1 View Network Show in Genome Browser |
| Other Names | Os01g0233800 |
| Description | AGC_PVPK_like_kin82y.4 - ACG kinases include homologs to PKA, PKG and PKC, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 7400509-7404312 Nucleotide Length: 1599 |
| Protein-coding | LOC_Os01g13270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g05100 |
| Downstream Genes | LOC_Os07g32380 LOC_Os02g05630 LOC_Os06g33549 LOC_Os06g48300 LOC_Os04g56450 LOC_Os02g15594 LOC_Os04g37904 LOC_Os04g52000 LOC_Os06g33530 LOC_Os06g44210 LOC_Os05g32600 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g13270.1 |
| Rice Genome Annotation | LOC_Os01g13270.1 |
| Ricechip | LOC_Os01g13270.1 |
| KEGG | osa:4324289 dosa:Os01t0233800-01 |
| Entrez-Gene | 4324289 |