RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g13390.1 View Network Show in Genome Browser |
| Other Names | Os01g0235100 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 7457835-7459959 Nucleotide Length: 537 |
| Protein-coding | LOC_Os01g13390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g03020 |
| Downstream Genes | LOC_Os03g39830 LOC_Os02g02520 LOC_Os11g13850 LOC_Os03g12020 LOC_Os09g30410 LOC_Os08g07540 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR6248 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g13390.1 |
| Rice Genome Annotation | LOC_Os01g13390.1 |
| Ricechip | LOC_Os01g13390.1 |
| KEGG | osa:4327776 dosa:Os01t0235100-01 |
| Entrez-Gene | 4327776 |