RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g13480.1 View Network Show in Genome Browser |
| Other Names | Os01g0235900 |
| Description | glutaredoxin, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 7517210-7518741 Nucleotide Length: 1176 |
| Protein-coding | LOC_Os01g13480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g07950 |
| Downstream Genes | LOC_Os03g63420 LOC_Os01g34620 LOC_Os12g35330 LOC_Os08g45140 LOC_Os06g44910 LOC_Os05g48930 LOC_Os04g32300 LOC_Os01g27140 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00480 rn00720 rn01100 rn01120 |
| Metacyc Pathways | TCA ANARESP1-PWY P105-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g13480.1 |
| Rice Genome Annotation | LOC_Os01g13480.1 |
| Ricechip | LOC_Os01g13480.1 |
| KEGG | osa:4327783 dosa:Os01t0235900-00 |
| Entrez-Gene | 4327783 |