RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g13550.1 View Network Show in Genome Browser |
| Other Names | Os01g0236800 |
| Description | beta-amylase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 7578091-7582923 Nucleotide Length: 1701 |
| Protein-coding | LOC_Os01g13550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os05g40410 LOC_Os02g15220 LOC_Os02g47900 LOC_Os07g05050 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-842 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g13550.1 |
| Rice Genome Annotation | LOC_Os01g13550.1 |
| Ricechip | LOC_Os01g13550.1 |
| KEGG | osa:9268236 dosa:Os01t0236800-01 |
| Entrez-Gene | 9268236 |