RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g13760.1 View Network Show in Genome Browser |
| Other Names | Os01g0239100 |
| Description | dnaJ domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 7712339-7721253 Nucleotide Length: 1050 |
| Protein-coding | LOC_Os01g13760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08560 LOC_Os01g06454 |
| Downstream Genes | LOC_Os05g38530 LOC_Os03g16860 LOC_Os03g60620 LOC_Os01g62290 LOC_Os11g47760 LOC_Os02g48110 LOC_Os03g16920 LOC_Os11g08470 LOC_Os02g43020 LOC_Os05g30480 LOC_Os11g08440 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1858a osa-miR1858b |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g13760.1 |
| Rice Genome Annotation | LOC_Os01g13760.1 |
| Ricechip | LOC_Os01g13760.1 |
| KEGG | osa:4326364 dosa:Os01t0239100-01 |
| Entrez-Gene | 4326364 |