RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g14040.1 View Network Show in Genome Browser |
| Other Names | Os01g0242500 |
| Description | D-tyrosyl-tRNA, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 7857826-7860061 Nucleotide Length: 534 |
| Protein-coding | LOC_Os01g14040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g13730 LOC_Os01g06020 |
| Downstream Genes | LOC_Os03g22160 LOC_Os02g47120 LOC_Os09g27050 LOC_Os08g35620 LOC_Os05g06940 LOC_Os07g42160 LOC_Os05g06890 LOC_Os05g06920 LOC_Os04g30780 LOC_Os06g37440 LOC_Os05g46580 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1846e |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g14040.1 |
| Rice Genome Annotation | LOC_Os01g14040.1 |
| Ricechip | LOC_Os01g14040.1 |
| KEGG | osa:4327697 dosa:Os01t0242500-01 |
| Entrez-Gene | 4327697 |