RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g15020.2 View Network Show in Genome Browser |
| Other Names | Os01g0254100 |
| Description | lissencephaly type-1-like homology motif, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 8420923-8430228 Nucleotide Length: 3357 |
| Protein-coding | LOC_Os01g15020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os01g21940 LOC_Os03g13220 LOC_Os12g03822 LOC_Os01g51300 LOC_Os02g14790 LOC_Os11g03990 LOC_Os04g59460 LOC_Os03g03150 LOC_Os01g74146 LOC_Os03g43890 LOC_Os01g42260 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g15020.2 |
| Rice Genome Annotation | LOC_Os01g15020.2 |
| Ricechip | LOC_Os01g15020.2 |
| KEGG | osa:4327709 dosa:Os01t0254100-01 |
| Entrez-Gene | 4327709 |