RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g15110.1 View Network Show in Genome Browser |
| Other Names | Os01g0254900 |
| Description | syntaxin, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 8475499-8479870 Nucleotide Length: 843 |
| Protein-coding | LOC_Os01g15110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0009606 | tropism | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005768 | endosome | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5337b |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g15110.1 |
| Rice Genome Annotation | LOC_Os01g15110.1 |
| Ricechip | LOC_Os01g15110.1 |
| KEGG | osa:4327713 dosa:Os01t0254900-01 |
| Entrez-Gene | 4327713 |