RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g15490.1 View Network Show in Genome Browser |
| Other Names | Os01g0259600 |
| Description | phosphoadenosine phosphosulfate, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 8701159-8708630 Nucleotide Length: 1509 |
| Protein-coding | LOC_Os01g15490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g12900 |
| Downstream Genes | LOC_Os07g32570 LOC_Os06g12250 LOC_Os03g15700 LOC_Os02g02840 LOC_Os03g50850 LOC_Os02g58730 LOC_Os01g43030 LOC_Os02g20850 LOC_Os02g50860 LOC_Os06g12790 LOC_Os08g28190 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | SO4ASSIM-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g15490.1 |
| Rice Genome Annotation | LOC_Os01g15490.1 |
| Ricechip | LOC_Os01g15490.1 |
| KEGG | osa:4326240 dosa:Os01t0259600-01 |
| Entrez-Gene | 4326240 |